CDS
| Accession Number | TCMCG005C31225 |
| gbkey | CDS |
| Protein Id | XP_020245705.1 |
| Location | complement(join(483220..483580,483716..483822,484488..484535,484606..484773,484853..485023,485888..486013,486270..486336,486441..486601,488106..488154,488230..488486,488582..488641,488802..488876,489529..489612,489711..489812,489904..490036,495966..496030,496109..496292,496875..497013,497084..497135,499775..499849,499930..500127,500249..500396,502038..502650,502803..502857,503349..503549,503718..503813,504214..504357,504444..504524,504653..504740,505742..505918,506035..506114,506195..506300,506487..506581,506651..506792,506877..506995,507279..507383,507792..507905,509258..509434,511335..511499,511793..511876,512273..512395,513259..513393,513498..513584,515895..516112,516227..516315,516523..516683,516859..516954,517066..517125,517397..517462,517590..517751)) |
| Gene | LOC109823749 |
| GeneID | 109823749 |
| Organism | Asparagus officinalis |
Protein
| Length | 2222aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA376608; |
| db_source | XM_020390116.1 |
| Definition | DNA polymerase epsilon catalytic subunit A isoform X3 |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | DNA polymerase epsilon catalytic subunit A |
| KEGG_TC | - |
| KEGG_Module |
M00263
[VIEW IN KEGG] |
| KEGG_Reaction |
R00375
[VIEW IN KEGG] R00376 [VIEW IN KEGG] R00377 [VIEW IN KEGG] R00378 [VIEW IN KEGG] |
| KEGG_rclass |
RC02795
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03032 [VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K02324
[VIEW IN KEGG] |
| EC |
2.7.7.7
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00230
[VIEW IN KEGG] ko00240 [VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko03030 [VIEW IN KEGG] ko03410 [VIEW IN KEGG] ko03420 [VIEW IN KEGG] ko05166 [VIEW IN KEGG] map00230 [VIEW IN KEGG] map00240 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map03030 [VIEW IN KEGG] map03410 [VIEW IN KEGG] map03420 [VIEW IN KEGG] map05166 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGAACGGAGATCGAAGGCGAAGGGATCAGTTCAATTCCAGAAGAAATCAATCGAAGCAGAAGCTTCGGCTCAACGCTGAAGAAGTTCTCGAAGCAAAACTAGGTTACGATCTTTTCACTGAAGGCGAGAAGAAGCTCGGATGGCTGCTTACACTGGCTCCTTCGTCTTGGGAAGACCAGGAGACGAACAAGATTTATAGTTGCGTGGATCTATATTTTGTTTCGCAGGATGTGTCTACATTCAAAATTAAGTACAAGTTTCCGCCTTATTTTTATGCTGCTACCAAGGACAAAACTCATCTTGAAGTTGAGGCATATCTTAGACGCAGATATGAAGGACAAATTGCGGACATAGAGATAGTAGATAAAGAGGATTTGGACCTAAGGAATCATCTTTCTGGTTTGCGTAGAACATACTTAAAGATCAGCTTTGATACCGTTCAACAATTAATGTCTGTAAAGAGTGATCTGGTGCATGTGGTTGAGAGGAACCAAGCAAAGATGGATGCTGCTGAAGCATTTGATAATGTATACAACAATAATAGCAAAGAAAGACTGCAAGATTATATAGATTATATCTTTGATCTTCGTGAATATGATGTTCCATACCATGTGCGGTTTGCAATTGATAATGATATTAGATGCGGACAGTGGTACGATGTCATTGTATCTGGTAGCAGTATATTGCTAGATAAGAGAACAGATCTTCTTCAACGTGCTGAAGTTCATGTCTGTGCGTTTGATATTGAGACAACCAAACTTCCTCTGAAATTTCCCGATGCTGAGTATGATCTGATAATGATGATATCATATATGATAGATGGACAAGGCTACTTGATCATTAATAAAGAGTGCGTAGGAGAGGATATTGAAGATTTGGAATATACACCTAAGCCAGAATTTGAGGGTTATTTCAAAGTAACAAATGCGAAGAATGAGGAAGAGCTTCTCAAATTATGGTTTGCACACATGCAAGAGGTGAAACCTGGCATATATGTTACTTATAACGGTGATTTCTTTGACTGGCCATTCTTGGAGAAAAGAGCTGCACATTATGGGGTTAAAATGAGTGAGGAAATAGGTTTCCAGTGTGATGACAATCAAGGGGAATGCCGTGCAAAGTTTTCTTGTCATCTTGATTGCTTTGCTTGGGTTAAACGAGACAGCTATCTCCCTCAAGGAAGCCATGGTCTAAAGGCTGTTACAAAGGCAAAACTGGGCTATGATCCATTGGAGGTGAACCCTGAAGACATGGTTCGCTTTGCCATGGAACAACCCCAGACAATGGCTTCTTATTCTGTATCAGATGCTGTTGCAACTTACTACCTATACATGACATATGTTCATCCATTTATTTTCTCCCTTGCAACTATCATACCCATGCCACCTGATGAGGTCTTGCGTAAGGGAAGTGGAACACTTTGTGAAATGCTTCTCATGGTCCAGGCATTTAGGGCCAATGTTGTCTGTCCTAACAAACACCAAGAGGATCCAGAGAAGTTCTATAACAACCGCCTTCTGGAAAGTGAGACATATATAGGAGGGCATGTTGAGTGCCTAGAAAGCGGTGTCTTCAGATCTGATCTTCCTACAAAATTTCAGCTGGATCCATCTGCATATGAGCAATTAATTGGGAATCTTGATCGCGATTTACATTATGCTATACAAGTAGAAGGAAAAATGGGCCTCGATTCAATTACTAACTATGAAGATGTGAAGAAAGCTATTATGGACAAGCTTATTTTGTTGCGAGATCATCCAATACGTGAGGAGTGTCCTCTAATATACCATCTGGATGTTGCTGCTATGTACCCAAACATTATTTTGACAAACAGGCTTCAGCCGCCATCAATAGTTTCAGATGTAGTATGCACTGCATGTGATTTCAATCGTCCGGGAAAAAATTGTCTTCGGAAACTTGATTGGGTTTGGCGAGGTGAAACCTATATGGCAAAAAGAAGTGATTATTATCATATAAAGAAGCAAATTGAGTCTGAGCTGGTTGAGTATGGTGGTGATCAGTCGTCGAAACCTTTTATTGACCTGCCCAAAGCAGAACAAAAGTTGAAGCTAAAAGAGCGTTTGAAGAAGTACTGCCAGAAGGCATATAAAAGGGTTCTTGACAAGCCCATAACTGAGCTTAGAGAAGCTGGGATATGCATGCGTGAAAATCCTTTCTATGTGGATACTGTGCGAAGTTTTCGAGACAGGAGGTACGAGTACAAGGGGCTTAATAAAGTATGGAAGGGAAAACTAGCAGATGCAAAAGCAAGTGGAAATCCAATGAAGGTTCAGGAAGCACAGGATATGGTTGTTCTCTATGATTCTTTACAGCTCGCTCATAAATGCATTCTTAATTCATTTTATGGATATGTTATGCGCAAGGGTGCTAGATGGTACTCAATGGAAATGGCTGGCGTTGTCACCTATACTGGTGCCAAAATCATTCAAAATGCTCGTTTACTAGTGGAAAAAATTGGAAGGCCTCTGGAACTGGATACTGATGGCATCTGGTGTGCTCTTCCTGGATCTTTCCCTGAAAACTTTACATTCAAAACAAAAGATGCAAAGAGAAAGCTCACAATATCATACCCCTGTGTCATGCTTAACGTTGATGTGGCAAGAAACAACACTAATGACCAATATCAGACACTGCAAGATCCTATCACTAAGACATATACTACACACAGTGAATGCTCCATTGAATTTGAAGTGGATGGACCATACAAGGCTATGATTCTTCCAGCTTCAAAGGAAGAGGGAATTTTAATTAAGAAGAGGTATGCTGTATTTAATGATGATGGAAGCTTAGCAGAACTAAAAGGTTTTGAAATCAAGAGAAGAGGTGAGCTGAAGCTCATAAAAGTTTTCCAGGCAGAGGTTTTCGACAAGTTCCTGCACGGGTCAACATTAGAGGAATGCTATGCAGCAGTTGCTGCAGTTGCAAACCGATGGCTAGATCTTCTGGATAATGAAGGAATTGATATTGCTGATAGCGAGTTGCTTGATTACATATCAGAATCAAGCACTATGAGTAAATCCTTAGTTGAGTATGGAGAACAAAAGTCCTGTGCTGTGACTACTGCAAGACGACTTGCTGATTTTCTTGGGGATACAATGGTTAAAGACAAAGGACTAAGATGTCAATATATTGTTGCACGTGAACCACAGGGTACTCCAGTAAGTGAGCGCGCCATTCCTGTTGCCATCTTTGAAACAGATACAGAAATTGGTAAATTCTACCTACGCAAATGGTGCAAAATTTCTGCTGATGCAGCCATTCGGTCTATCATTGACTGGTCTTATTACAAGCAACGTCTTTNNNNNNNNNNCTCCATCTTATATTCCAAGCAAATGCTTCTTGTTTCCCTTAATTTAATACTGGCCCGTTATTTGCAGGTTTCTAATCCTGTTCCTAGAGTTCTTCATCCTGACTGGCTGCACAAAAAGGTTCGGGAGAAGGATGACAGATTTCGCCAGCGAAAATTGGTTGATATCTTCAGTACAATGAGTAAAGATGCGGGTGATCCAGATTGTGGGGATCTAGAAGACTTTGCGAACAAACAATCTTCTTCTAGGAGTGGGCCTAGGCCTATAGTTCGTAGCTTTGAAATTAACAAGGAAAATTATTTCTCCAGGCCAGCCTGTCCCGTATCCGAAATGCCTGCAAATAACCAGCAGGACAATGCAGCTGCCATTAGGTTCCCCCATCCTCTCATGCCGTCACATCAAAATGGCTCCACGACTGAAAGTATTGACAGAGATACTGATTATCAAGGATGGCTTCAACTCAAGAAGAGAAAATGGAGAGAAATTCGCGAGGAAAGGAAGAGGCGTAGATTAGGAAACAGGGGGAAACCATCTCAAGCTGTTGGTGCAACTAAATTACCTCGATCTGTGTCTAGCTGTAGGCGAGATCAAGATAAGAACGGAGTTAGTTCATTCTTCAGAAAACATGAGTTTTCTCTTATCAGGTCACACTGGCAGATAATACAGCTTGTTTCAAGCACACATCCTGGGCGCTTTTTCGCTTGGGTCATTGCTGATGGAATAATGAACAAAATCTCCATAACTGTTCCTAGAGTGTTTTATCTCAATTCTAAAGCGCCCGTTACTGAAGAATTTCCAGGGAGGCGTGTTAATAAGATTCTTCCTCATAGCAGACCAGTTTTCAATCTAATCGAGGTTTGCATAGATGAAGATCAATTCAGGGCGGAAAGCAGAAAACTTGCTATTCACTTAGCCGATCCAGAAGTCGAGGGGATATATGAAACTAAGGTTCCATTAGAATTTAATGCAATCCTCCAGATTGGTTGTGTTTGTAAGGTGGACAAAACCGCAAGGGTTCGTAATGCGCAGGATGGTTGGAATATGAGCGAGTTACAGATGAAGACTACAACTGAATGCTCTTATTTGGAGCAAGGGATTTCTTTTTTCTATTTGTATCACAGTTTCTTGGAGGGAAGGGGGATATATATTGCATATATTGCTGTATCTAGCACCATATCTGCCATTGTTGTCAATCCATTTCAAAACAAAGAACTCTCCTCATCTCTTCTTGAAAAACAATTCCGTGAAGCTTGCCAAGCGTTGTCCATTGACCCTCCAGCACATGGAAGTCACATAACTTTCAAGGTGGACTATGTTAAATCAATCGAAGCTGGCGAGAAGCATTTGCAAAGAGCATTAACTGAATTCAGAGGGAAGAATGCTGGGCCAACTATTGGTCTCATAGAATCCCCAAACTTCCAATCCATTAAATCAGCTATAAGAGTTTTAGATGATTTCCCTTGTGTCAGCATTCCATGTAATGCTCGTGACAGCTGTTATCAGGTTCTTGGTTGGCAAGTCACGGCTGGAAAAATTGGCATGCAACGATGTGCTGCCTCGTCACAGTGGTTCAATGAACGAGTTCTTCTATCAAGATATGCTCATGTACCTTTAGGAAATTTTGAGGTCGATTGGCTTCTTTTTACTGCTGATGTTTTCTTCTCTAGGGCATTACATGATCAACAGCAGATACTTTGGACATCTGATGATGGCATTCCCGATCTGGGAGGTATTTTCGAGGGAGATACATGCTTTGTTGATGAAGTTAGTCAACCAGCTTTTACTTATCCTGGGGCCTACAGAAGAGTGGCGGTTGAATTAAAGATTCATCATTTAGCTGTCAATGCTCTTCTCAAAAGCAGCCAAATTGAAGAAATGGAAGGAGGATCTTTATTTGGATATGACCATGAAATGCATTCTGGATCACATGTTCCTGAAACTGATTTTGATGAAACTACCTCATGTGCACCTGCATTTCGAGTACTTAAGCAACTGATACAAAGATGCATGTCGGATGCAGCGGCATCCGGAAATGTATTTGCTGATGCTATACTGCAACACCTTTATCGATGGCTTTGCAGCCCTCTCTCCAAACTTCATGATCCTGCTCTTCATCGTGTTCTGCACAAGGTCATGAAAAAGATTTTTGCTCATTTGTTGGCTGAACTTCGGAAACTTGGGGCCACACTAATCTTTGCAAATTTCTCTAAAATTATTATAGACACTGGAAAAATGAATCTGCCAGCAGCCCATGCATACTGTGATTGTTTATTAAAAACTCTGCATTCAAGGGATCTTTTTCAATGGATCGATCTTGAACCTTTGCATTTCTGGCATTCTTTCCTATTTATGGATCAGTATAACTATGGGGGGATTCAAGCCAAAATCACAACCGGAAGTGATGTGGAAATTACAGAGGATGAATCTCAGGTGGAAATCATATCGAGCTGGAATATAGCAGAATACCTGCCAAAAGAAACTCAGGATCATTTTATTCTTATCGCCTCTGAGTTCATGTATATCCCTTGGAAGTACTCAAGAGAGCAAATTAGAATGCCTATGGCTACTACAGATGGTAGTACATGTACTCCATCGATCACTATCACAGATGCTGAAAGACTTGAAGCATCTGTTACAGAGTATCTTAAAGACCAGGTCAGCAGTTACTTCACTCAGAAACTTTTTCGGATCGTGGAGGATACTCTTCACCACTTCAAAGGAAAGAAGAAAATAGATGAAGGTGATTCTAAAAACCGTGGACTATCCCAGACGTCTGATTCTAATCCATATAAAGGTGACGCTGCATTGGAATTCATCAAACATGTCTGTGCCGTCCTCTCTCTGGACCATAATGTTCAGCATGACATTCTGAAGATGAGAAAAAATTTATTAAAGATTGTTCGGGTGAAGGAGTTTTCCCCAGAAGCACAATTCCATGATCCGTGTCCATCCTTCACGCTTCCGAATGTTATTTGCAGCTATTGCAATGATTGCCGTGACCTTGACTTATGTCGTGATTCATCACTTCTGGATCAAGAATGGCGCTGTGCCGCGCCACAATGTGGGCAGCCGTACAATCGTGAACAGATGGAAAATGCTCTTCTTCAAATAGTTCGACAGAGGGAAAGGCTGTACCATCTGCAGGACCTTGTGTGCCTTAGATGCAGACAAGTTAAAGGCGCGCATTTGGTAGAGCAATGTATATGTGGCGGCTTATTCAGGTGCAAAGAATCTGCTTCGGAATTTCAGAGCAAAATGCTAGTGTTTAGGGACATTTCCATTCGTCAAAAGTTCCAACTGCTACAGGATTGTACCTCTTGGATTTTAGAAGTGAGGTGA |
| Protein: MNGDRRRRDQFNSRRNQSKQKLRLNAEEVLEAKLGYDLFTEGEKKLGWLLTLAPSSWEDQETNKIYSCVDLYFVSQDVSTFKIKYKFPPYFYAATKDKTHLEVEAYLRRRYEGQIADIEIVDKEDLDLRNHLSGLRRTYLKISFDTVQQLMSVKSDLVHVVERNQAKMDAAEAFDNVYNNNSKERLQDYIDYIFDLREYDVPYHVRFAIDNDIRCGQWYDVIVSGSSILLDKRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDLIMMISYMIDGQGYLIINKECVGEDIEDLEYTPKPEFEGYFKVTNAKNEEELLKLWFAHMQEVKPGIYVTYNGDFFDWPFLEKRAAHYGVKMSEEIGFQCDDNQGECRAKFSCHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAFRANVVCPNKHQEDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTKFQLDPSAYEQLIGNLDRDLHYAIQVEGKMGLDSITNYEDVKKAIMDKLILLRDHPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVSDVVCTACDFNRPGKNCLRKLDWVWRGETYMAKRSDYYHIKKQIESELVEYGGDQSSKPFIDLPKAEQKLKLKERLKKYCQKAYKRVLDKPITELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLADAKASGNPMKVQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGRPLELDTDGIWCALPGSFPENFTFKTKDAKRKLTISYPCVMLNVDVARNNTNDQYQTLQDPITKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGSLAELKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYAAVAAVANRWLDLLDNEGIDIADSELLDYISESSTMSKSLVEYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVAREPQGTPVSERAIPVAIFETDTEIGKFYLRKWCKISADAAIRSIIDWSYYKQRLXXXXSILYSKQMLLVSLNLILARYLQVSNPVPRVLHPDWLHKKVREKDDRFRQRKLVDIFSTMSKDAGDPDCGDLEDFANKQSSSRSGPRPIVRSFEINKENYFSRPACPVSEMPANNQQDNAAAIRFPHPLMPSHQNGSTTESIDRDTDYQGWLQLKKRKWREIREERKRRRLGNRGKPSQAVGATKLPRSVSSCRRDQDKNGVSSFFRKHEFSLIRSHWQIIQLVSSTHPGRFFAWVIADGIMNKISITVPRVFYLNSKAPVTEEFPGRRVNKILPHSRPVFNLIEVCIDEDQFRAESRKLAIHLADPEVEGIYETKVPLEFNAILQIGCVCKVDKTARVRNAQDGWNMSELQMKTTTECSYLEQGISFFYLYHSFLEGRGIYIAYIAVSSTISAIVVNPFQNKELSSSLLEKQFREACQALSIDPPAHGSHITFKVDYVKSIEAGEKHLQRALTEFRGKNAGPTIGLIESPNFQSIKSAIRVLDDFPCVSIPCNARDSCYQVLGWQVTAGKIGMQRCAASSQWFNERVLLSRYAHVPLGNFEVDWLLFTADVFFSRALHDQQQILWTSDDGIPDLGGIFEGDTCFVDEVSQPAFTYPGAYRRVAVELKIHHLAVNALLKSSQIEEMEGGSLFGYDHEMHSGSHVPETDFDETTSCAPAFRVLKQLIQRCMSDAAASGNVFADAILQHLYRWLCSPLSKLHDPALHRVLHKVMKKIFAHLLAELRKLGATLIFANFSKIIIDTGKMNLPAAHAYCDCLLKTLHSRDLFQWIDLEPLHFWHSFLFMDQYNYGGIQAKITTGSDVEITEDESQVEIISSWNIAEYLPKETQDHFILIASEFMYIPWKYSREQIRMPMATTDGSTCTPSITITDAERLEASVTEYLKDQVSSYFTQKLFRIVEDTLHHFKGKKKIDEGDSKNRGLSQTSDSNPYKGDAALEFIKHVCAVLSLDHNVQHDILKMRKNLLKIVRVKEFSPEAQFHDPCPSFTLPNVICSYCNDCRDLDLCRDSSLLDQEWRCAAPQCGQPYNREQMENALLQIVRQRERLYHLQDLVCLRCRQVKGAHLVEQCICGGLFRCKESASEFQSKMLVFRDISIRQKFQLLQDCTSWILEVR |